Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942848.1_cds_XP_016486201.1_77055
CDS Infomation

[gene=LOC107806545] [db_xref=GeneID:107806545] [protein=IRK-interacting protein-like] [protein_id=XP_016486201.1] [location=complement(join(43552..44934,45192..45260))] [gbkey=CDS]
Sequence

ATGGCTAATTCTTCTTCTTCTTCCTCAAAATCCTCCATTTCTCCTCGTCATCCCCCTCTT
TTTACTCCTATAGAAGAAGGGAATGAAGAAGAGGAATATTCACAAGGAAGAAGCAGTTTT
AGAGCAGAAACAACACCAAGTGAAGTTGAATACAGACACCATTCTACACCTTTACATCAA
CACTCTAATAATACAGAGAATAAAGGCAAAGGGTGTACAAAAAAGAGGCCAGAAAATGGA
GAAGATGAAAGAGGAGTTTTATGCAACAAATGCAGGCCAAGTAACAGAGAGAGAATTACT
CATGTAGTTCCTTTAGACAACAAAAACAATTCTATATCAAGTCCACATGGTATTTTCAAA
TCAGTTCTCTCAACTTTAGTTAAAAAAAGTCCAAGATTATCATCATCTTCAGATGTTGAG
TCTTCTACTGGAGGGTCAAGAGAAGAACAATGGAAAATAGCAGTAGCTGAACTTTCACAT
AAGTTAATTCAAGCTACAAGAAAAAGAGATGAAGCTATTTTAGAAGCATCAAGATTGAAG
TTTTCTATGGTTGAGCTTGAAAAAAAGCTAAACAAGCTTGAAATTTATTGTCATAGTTTG
AAATCTGGGCTTGAAGTTTGTAGCAACAATGTTAATTCTCAGCACCAAATTACCAAATCC
CCTCATCTCCAACGTGTTAAATTTGGTGAAGAAGATAAAGTTATTGAACATTTCTTGGTT
ATGGTTTCTGAGGCAAGATCTTCTGTTAGAAATTTAAGTCGATCAATGACATTTCAGTTA
AGACAAATTGGTGGTAAAGTTTATGATCGAATTGCATTACTTCTTCAACCATATGATATT
AAGGTTTCAATTTCAAGAAATCCAAGAGGGTTAATTGTATATCTTGAAGCTTTATTAAAC
AAAGCTTTTTATGAGGATTTTGGGTCAATTGGATTTCAAAAAGGTTCTTGTAATCAAATC
TTGAACCCCATTGATCGTTGTGAAGCAAATTTTGGTTTGTATAATCGTTTGAAGGATTTA
ACGTGGGAAGAAGTTTTGAGTAAAGGGACAAGATTTTACAGTGAAGAATTCAGTAAATTT
TGTGATAGGAAAATGAGTGAAATTGTGGCTATGTTGGGTTGGAACCGTGCTTGGCCTGAA
CCACTTTTACAAGCTTTTTTTGGTGCATCAAAAGCAGTGTGGTTAGTGCATTTATTGGCT
AATTCACTGCACCCTGGACTGCCTATTTTTAGAGTGGATAAAGAAATGAAATTTGACTCA
GTTTATATGGAAGATATGGGTGGAGATAAAGCTAAGAAATTGGTTCCAGCCATGGTTCGA
ATCATGGTCACACCTGGGTTCTATGTCTATGACAATGTGGTCAAGTGCAAGGTGCTTAGC
AGGTATAATAATAGTATTAACAATATTTCATTTGATGGTAATGAAAAGGGTTTAACTCCA
TCACCTACATAA

Peptide Sequence

PEP ID

XP_016486201.1
PEP Infomation

PREDICTED: IRK-interacting protein-like [Nicotiana tabacum]
Sequence

MANSSSSSSKSSISPRHPPLFTPIEEGNEEEEYSQGRSSFRAETTPSEVEYRHHSTPLHQ
HSNNTENKGKGCTKKRPENGEDERGVLCNKCRPSNRERITHVVPLDNKNNSISSPHGIFK
SVLSTLVKKSPRLSSSSDVESSTGGSREEQWKIAVAELSHKLIQATRKRDEAILEASRLK
FSMVELEKKLNKLEIYCHSLKSGLEVCSNNVNSQHQITKSPHLQRVKFGEEDKVIEHFLV
MVSEARSSVRNLSRSMTFQLRQIGGKVYDRIALLLQPYDIKVSISRNPRGLIVYLEALLN
KAFYEDFGSIGFQKGSCNQILNPIDRCEANFGLYNRLKDLTWEEVLSKGTRFYSEEFSKF
CDRKMSEIVAMLGWNRAWPEPLLQAFFGASKAVWLVHLLANSLHPGLPIFRVDKEMKFDS
VYMEDMGGDKAKKLVPAMVRIMVTPGFYVYDNVVKCKVLSRYNNSINNISFDGNEKGLTP
SPT

Transcript Sequence

Gene sequence data has not been registered.